23 | 09 | 2020
PUBLICATIONS
RESEARCH COOPERATIONS
NVIDIA INSTRUCTOR

RESEARCH PAPERS COAUTHORED BY M. UJALDON

Concurrency & Computation: Practice & Experience, 2018

Title: Energy-based Tuning of Convolutional Neural Networks on Multi-GPUs
Author(s): F.M. Castro, N. Guil, M.J. Marín-Jiménez, J. Pérez, M. Ujaldón.
Published in: Concurrency and Computation: Practice and Experience.
Reference: Volume 31, Number 21, special issue. https://doi.org/10.1002/cpe.4786 (22 pages).
Date: November, 2019.
 

 

Sustainable Computing, 2018

Title: Energy-aware Acceleration on GPUs: Findings on a Bioinformatics Benchmark
Author(s): J. Pérez, A. Rodríguez, J.F. Chico, D. López-Rodríguez, M. Ujaldón.
Published in: J. Sustainable Computing. Elsevier Science.
Reference: Volume 20, pages 88-101.
Date: December, 2018.
 

 

BMC Bioinformatics, 2018

Title: DNA Sequences Alignment in Multi-GPUs: Acceleration and Energy Payoff
Author(s): J. Pérez, E. Sandes, A. Melo, M. Ujaldón.
Published in: BMC Bioinformatics.
Reference: Volume 19, Supplement 14, pages 161-176.
Date: November, 2018.
 

 

Concurrency & Computation: Practice & Experience, 2018

Title: Energy-based Tuning of Metaheuristics for Molecular Docking on Multi-GPUs
Author(s): J. Pérez, B. Imbernón, J.M. Cecilia, M. Ujaldón.
Published in: Concurrency and Computation: Practice and Experience.
Reference: Volume 30, number 17, pages 1-17.
Date: September, 2018.
 

 

Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, 2016

Title: Legendre Moments as High Performance Bone Biomarkers: Computational Methods and GPU Acceleration
Author(s): J.A. Lachiondo, M. Ujaldón, R. Berretta, P. Moscato.
Published in: Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization.
Reference: Volume 4, numbers 3-4, pages 146-163.
Date: October, 2016.
 

 

Current Bioinformatics, 2016

Title: GPU Acceleration of an Entropy-based Model to Quantify Epistatic Interactions Between SNPs
Author(s): C. Riveros, M. Ujaldón, P. Moscato.
Published in: Current Bioinformatics.
Reference: Volume 11, number 4, pages 396-407.
Date: September, 2016.
 

 

Journal Cluster Computing, 2016

Title: Dynamic Load Balancing on Heterogeneous Clusters for Parallel Ant Colony Optimization
Author(s): A. Llanes, J.M. Cecilia, A. Sánchez, J. M. García, M. Amos, M. Ujaldón.
Published in: Journal Cluster Computing.
Reference: Volume 19, number 1, pages 1-11.
Date: March, 2016.
 

 

Concurrency and Computation: Practice and Experience, 2014

Title: Towards an Energy Efficient Heterogeneous Processors: Findings on Virtual Screening Methods
Author(s): G.D. Guerrero, J.M. Cebrián, H. Pérez-Sánchez, J.M. García, M. Ujaldón, J.M. Cecilia.
Published in: Concurrency and Computation: Practice and Experience.
Reference: Volume 26, issue 10, pages 1832-1846.
Date: July, 2014.
 

 

Journal of Supercomputing, 2014 (2)

Title: Comparative Evaluation of Platforms for Parallel Ant Colony Optimization
Author(s): G.D. Guerrero, J.M. Cecilia, A. Llanes, J.M. García, M. Amos, M. Ujaldón.
Published in: Journal of Supercomputing.
Reference: Volume 69, Issue 1, pages 318-329.
Date: July, 2014.
 

 

Journal of Supercomputing, 2014

Title: Evaluating the SAT Problem on P systems for Different High-Performance Architectures
Author(s): J.M. Cecilia, J.M. García, G.D. Guerrero, M. Ujaldón.
Published in: Journal of Supercomputing.
Reference: Volume 69, Issue 1, pages 248-272.
Date: July, 2014.
 

 

Annals of Multicore and GPU Programming, 2014

Title: Exploiting Kepler Capabilities on Zernike Moments
Author(s): A. Ruiz, M. Ujaldón.
Published in: Annals of Multicore and GPU Programming.
Reference: Volume 1, number 1, pages 27-37.
Date: April, 2014.
 

 

Journal Parallel and Distributed Computing, 2014

Title: Efficient Data Partitioning for the GPU Computation of Moment Functions
Author(s): M.J. Martín-Requena, P. Moscato, M. Ujaldón.
Published in: Journal Parallel and Distributed Computing.
Reference: Volume 74, number 1, pages 1994-2004.
Date: January, 2014.
 

 

Book Medical Image Processing and Computational Vision, 2013

Title: A Survey for the Automatic Classification of Bone Tissue Images
Author(s): J.E. Gil, J.P. Aranda, E. Mérida-Casermeiro, M. Ujaldón.
Published in: Book "Topics in Medical Image Processing and Computational Vision". Computational Vision and Biomechanics Series. Ed. Springer (chapter 10).
Reference: Volume 8, pages 181-200.
Date: April, 2013.
 

 

Journal of Supercomputing, 2013

Title: Enhancing GPU Parallelism in Nature-inspired Algorithms
Author(s): J.M. Cecilia, A. Nysbet, M. Amos, J.M. García, M. Ujaldón.
Published in: Journal of Supercomputing.
Reference: Volume 63, number 3, pages 773-789.
Date: March, 2013.
 

 

Journal Parallel and Distributed Computing, 2013

Title: Enhancing Data Parallelism for Ant Colony Optimization on GPU
Author(s): J.M. Cecilia, J.M. García, A. Nisbet, M. Amos, M. Ujaldón.
Published in: Journal Parallel and Distributed Computing. Special Issue on Metaheuristics on GPUs
Reference: Volume 73, number 1, pages 42-51.
Date: January, 2013.
 

 

Intl. Journal for Numerical Methods in Biomedical Engineering, 2012

Title: Efficient Biomarkers for the Characterization of Bone Tissue
Author(s): J.E. Gil, J.P. Aranda, E. Mérida-Casermeiro, M. Ujaldón.
Published in: Intl. Journal for Numerical Methods in Biomedical Engineering.
Reference: Volume 62, number 2, pages 787-803.
Date: December, 2012.
 

 

Journal of Supercomputing, 2012

Title: Stencil Computations on Heterogeneous Platforms for the Jacobi Method: GPUs versus Cell BE
Author(s): J.M. Cecilia, J.L. Abellán, J. Fernández, M.E. Acacio, J.M. García, M. Ujaldón.
Published in: Journal of Supercomputing.
Reference: Volume 62, number 2, pages 787-803.
Date: November, 2012.
 

 

Journal Real Time Image Processing, 2012

Title: The 2D Wavelet Transform on Emerging Architectures: GPUs and Multicores
Author(s): J. Franco, G.Bernabé, J. Fernández, M. Ujaldón.
Published in: Journal Real-Time Image Processing. Special Issue on Parallel Computing for Real-Time Image Processing.
Reference: Volume 7, number 3, pages 145-152.
Date: June, 2012.
 

 

Journal Soft Computing, 2012

Títle: The GPU on the Simulation of Cellular Computing Models
Author(s): J.M. Cecilia, J.M. García, G.D. Guerrero, M.A. Martínez-del-Amor, M.J. Pérez-Jiménez, M. Ujaldón.
Published in: Journal Soft Computing. Special Issue on Evolutionary Computation on General-Purpose Graphics Processing Units.
Reference: Volume 16, number 2, pages 231-246.  
Date: February, 2012.
 

 

Journal High Performance Computing Applications, 2011

Title: Color and Texture Analysis on Emerging Parallel Architectures
Author(s): F. Igual, R. Mayo, T. Hartley, U. Catalyurek, A. Ruiz, M. Ujaldón.
Published in: Journal High Performance Computing Applications.
Reference: Volume 25, number 4, pages 404-427.
Date: November, 2011.
 

 

Book Computational Vision and Medical Image Processing, 2011

Title: Leveraging Graphics Hardware for an Automatic Classification of Bone Tissue
Author(s): M.J. Martín-Requena, M. Ujaldón.
Published in: Book "Computational Vision and Medical Image Processing - Recent Trends". Computational Methods in Applied Sciences Series. Ed. Springer (chapter 19).
Reference: Pages 209-228.
Date: November, 2010.
 

 

Journal of Applied Computational Electromagnetic Society, 2010

Title: Using GPUs for Accelerating Electromagnetic Simulations
Author(s): M. Ujaldón.
Published in: Journal of Applied Computational Electromagnetic Society. Special Issue on Hardware Accelerated Computational Techniques for Electromagnetic Simulations of Complex Problems.
Reference: Volume 25, number 4, pages 294-302.
Date: April, 2010.
 

 

Book Advances in Parallel Computing (1), 2010

Title: The GPU on the Matrix-Matrix Multiply: Performance Study and Contributions
Author(s): J.M. Cecilia, J.M. García-Carrasco, M. Ujaldón.
Published in: Book "Advances in Parallel Computing. Parallel Computing: From Multicores and GPUs to Petascale" (chapter 19).
Reference: Pages 331-340.
Date: 2010.
 

 

Book Advances in Parallel Computing (2), 2010

Title: Exploring the GPU for Enhancing Parallelism on Color and Texture Analysis
Author(s): F. Igual, R. Mayo, U. Catalyurek, T. Hartley, A. Ruiz, M. Ujaldón.
Published in: Book "Advances in Parallel Computing. Parallel Computing: From Multicores and GPUs to Petascale" (chapter 19).
Reference: Pages 299-306.
Date: 2010.
 

 

Book High Throughput Image Reconstruction and Analysis, 2009

Title: Scalable Image Registration and 3D Reconstruction at Microscopic Resolution
Author(s): L. Cooper, K. Huang, A. Ruiz, M. Ujaldón.
Published in: Chapter of book High Throughput Image Reconstruction and Analysis. ArTech House Publishers
Reference: Pages 173-199.
Date: 2009.
 

 

Book Advances in Parallel Computing, 2009

Title: Processing of Large-Scale Biomedical Images on a Cluster of Multi-Core CPUs and GPUs
Author(s): U. Catalyurek, T. Hartley, O. Sertel, M. Ujaldón, A. Ruiz, J. Saltz, M. Gurcan.
Published in: Book "Advances in Parallel Computing. High Speed and Large Scale Scientific Computing". IOS Press (chapter 18).
Reference: Pages 341-364.
Date: 2009.
 

 

Intl. Journal of Data Mining and Bioinformatics, 2009

Title: Stroma Classification for Neuroblastoma on Graphics Processors
Author(s): A. Ruiz, O. Sertel, M. Ujaldón, U. Catalyurek, J. Saltz, M. Gurcan.
Published in: Intl. Journal of Data Mining and Bioinformatics. Ed. Inderscience.
Reference: Volume 3, number 3, pages 280-298.
Date: 2009.
 

 

Journal of Signal Processing Systems, 2009

Title: Non-rigid Registration for Large Set of Microscopic Images on Graphics Processors
Author(s): A. Ruiz, M. Ujaldón, L. Cooper, K. Huang.
Published in: Journal of Signal Processing Systems for Signal, Image and Video Technology. Special Issue on Biomedical Imaging.
Reference: Volume 55, number 1, pages 229-250.
Date: January, 2009.
 

 

Journal of Parallel and Distributed Computing, 2008

Title: Recognition of Circular Patterns on GPUs: Performance Analysis and Contributions
Author(s): A. Ruiz, N. Guil, M. Ujaldón.
Published in: Journal of Parallel and Distributed Computing. Special Issue on General-Purpose Parallel Processing Using GPUs.
Reference: Volume 68, number 10, pages 1329-1338.
Date: October, 2008.
 

 

Pattern Recognition Letters, 2008

Title: On the Computation of the Circle Hough Transform by a GPU Rasterizer
Author(s): M. Ujaldón, A. Ruiz, N. Guil.
Published in: Pattern Recognition Letters.
Reference: Volume 29, number 3, pages 309-318.
Date: March, 2008.
 

 

Libro Parallel Computing, 2006

Title: Exploiting Parallelism on Irregular Applications Using the GPU
Author(s): M. Ujaldón, J. Saltz.
Published in: Book "Parallel Computing: Current & Future Issues of High-End Computing" from the John von Neumann Institute for Computing Series (chapter 33).
Reference: Pages 639-646.
Date: 2006.
 

 

Intl. Journal of Electronic Business, 2005

Title: The GPU as an Indirection Engine for a Fast Information Retrieval
Author(s): M. Ujaldón, J. Saltz.
Published in: International Journal of Electronic Business.
Reference: Volume 3, number 3/4, pages 316-327.
Date: July-August 2005.
 

 

The Journal of Supercomputing, 2000

Title: Compile-Time and Run-Time Support for the Parallelization of Sparse Matrix Updating Algorithms
Author(s): G. Bandera, M. Ujaldón, E.L. Zapata.
Published in: The Journal of Supercomputing.
Reference: Volume 17, number 3, pages 263-276.
Date: November, 2000.
 

 

IEEE Transactions on Parallel and Distributed Systems, 1997

Title: Vienna-Fortran/HPF Extensions for Sparse and Irregular Problems and Their Compilation
Author(s): M. Ujaldón, E.L. Zapata, B. Chapman, H. Zima.
Published in: IEEE Transactions on Parallel and Distributed Systems.
Reference: Volume 8, number 10, pages 1068-1083.
Date: October, 1997.
 

 

Journal of Parallel and Distributed Computing, 1996

Title: Parallelization Techniques for Sparse Matrix Applications
Author(s): M. Ujaldón, E.L. Zapata, S.D. Sharma, J. Saltz.
Published in: Journal of Parallel and Distributed Computing. Academic Press.
Reference: Volume 38, number 2, pages 256-266.
Date: November, 1996.
 

 

Libro Advances in Parallel Computing, 1995

Title: Sparse Block and Cyclic Data Distributions for Matrix Computations
Author(s): R. Asenjo, L.F. Romero, M. Ujaldón, E.L. Zapata.
Published in: Book in Advances in Parallel Computing Series (chapter 10). Elsevier Science. North-Holland, Amsterdam (Holland).
Reference: Pages 359-378.
Date: 1995.
 

 

Libro de Kluwer Academic Publishers, 1995.

Title: Data-Parallel Computation for Sparse Codes. A Survey and Contributions
Author(s): M. Ujaldón, E.L. Zapata, B. Chapman, H. Zima.
Published in: Book "Languages, Compilers, and Run-Time Systems for Scalable Computers'' (chapter 19). Kluwer Academic Publishers.
Reference: Pages 253-264.
Date: 1995.
 

 

Journal Physical Review, 1994

Title: Molecular Dynamics Simulation on Simple Fluids: Departure from linearized hydrodynamic behaviour of the dynamical structure factor
Author(s): E. Enciso, N.G. Almarza, V. del Prado, F.J. Bermejo, E.L. Zapata, M. Ujaldón.
Published in: Journal Physical Review E.
Reference: Volume 50, number 2, pages 1336-1340.
Date: August, 1994.
 

 

Journal Microprocessing and Microprogramming, 1993

Title: Parallel WZ Factorization on Mesh Multiprocessors
Author(s): R. Asenjo, M. Ujaldón, E.L. Zapata.
Published in: Journal Microprocessing and Microprogramming.
Reference: Volume 38, number 5, pages 319-326.
Date: September, 1993.
 

 

IAHR'20

Title: Weather Projections and Dynamical Downscaling for the Republic of Panama: Evaluation of Implementation Methods via GPGPU Acceleration
Author(s): R. Pinzón, M. Muller, T. Nakaegawa, J. Sánchez-Galan, J. Fábrega, M. Ujaldón.
Conference: 22nd Congress of Intl. Association for Hydro Environment Engineering and Research (IAHR'20).
Publication: Proceedings.
Place and date: Sapporo (Japan). September, 14-17, 2020.
 

 

GTC'17

Title: DNA Sequences Alignment in Multi-GPUs: Energy Payoff on Speculative Executions
Author(s): J. Pérez, E. Sandes, A. Melo, M. Ujaldón.
Conference: Graphics Technology Conference (GTC'17).
Publication: Talk on-line.
Place and date: San Jose (California, United States). May, 8-11, 2017.
 

 

IWBBIO'17

 

Title: Smith-Waterman Acceleration in Multi-GPUs: A Performance per Watt Analysis
Author(s): J. Pérez, E. Sandes, A. Melo, M. Ujaldón.
Conference: 5th International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO'17).
Publication: Proceedings published as Lecture Notes in Bioinformatics 10209, Part II, pages 1-12.
Place and date: Granada (Spain). April, 26-28, 2017.
 

 

CARLA'16

Títle: Dense and Sparse Matrix-Vector Multiplication on Maxwell GPUs with PyCUDA
Author(s): F.N. Álvarez, J.A. Ortega-Toro, M. Ujaldón.
Conference:
IX Latin American High Performance Computing Conference (CARLA 2016).
Publication: Proceedings.
Place and date: Mexico City, August, 29th - September 1st, 2016.
 

 

CSE'16

Títle: HPC Accelerators with 3D Memory
Author(s): M. Ujaldón.
Conference:
19th IEEE International Conference on Computational Science and Engineering (CSE 2016).
Publication: Proceedings IEEE Computer Society Press, pages 320-328.
Place and date: Paris (France), August, 24-26, 2016.
 

 

AMDO'16

Títle: CUDA achievements and GPU challenges ahead
Author(s): M. Ujaldón.
Conference: IX Conference on Articulated Motion and Deformable Objects (AMDO'16).
Publication: Invited paper in proceedings published as Lecture Notes in Computer Science, vol. 9756, pages 207-217.
Place and date: Palma de Mallorca (Spain). July, 13-15, 2016.
 

 

IWBBIO'16

Title: Neuroimaging Registration on GPU: Energy-aware Acceleration
Author(s): F.N. Álvarez, J.A. Cabrera, J.F. Chico, J. Pérez, M. Ujaldón.
Conference: 4th International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO'16).
Publication: Proceedings published as Lecture Notes in Bioinformatics, vol. 9656, pages 627-638.
Place and date: Granada (Spain). April, 20-22, 2016.
 

 

GTC'14 (2)

Títle: Applying Dynamic Parallelism to High Performance Normalization of Gene Expressions
Author(s): R.P. Souto, D. Augusto, P.L. Silva, C. Osthoff, A.T. Vasconcelos, O. Trelles, A. Rodríguez, M. Ujaldón.
Conference: Graphics Technology Conference (GTC'14).
Publication: Poster P4209 in session Bioinformatics & Genomics (BG10).
Place and date: San Jose (California). March, 24-27, 2014.
 

 

GTC'14

Title: Raising the Roofline on GPU Applications with Stacked Memory
Author(s): L.A. Barba, M. Ujaldón.
Conference: Graphics Technology Conference (GTC'14).
Publication: Talk on-line.
Place and date: San Jose (California, United States). March, 24-27, 2014.
 

 

IWBBIO'14

Title: Entropy-based High Performance Computation of SNP-SNP Interactions Using GPUs
Author(s): C. Riveros, P. Moscato, M. Ujaldón.
Conference: 2nd International Work-Conference on Bioinformatics and Biomedical Engineering IWBBIO'14).
Publication: Proceedings, pages 539-550.
Place and date: Granada (Spain). April, 7-9, 2014.
 

 

PPMG'14

Títle: Optimizando los Momentos de Zernike sobre Kepler
Author(s): A. Ruiz, M. Ujaldón.
Conference: First Congress on Parallel Programming Multicore and GPU (PPMG'14).
Publication: Proceedings, pages 3-12.
Place and Date: Granada (Spain). February, 6-7, 2014.
 

 

SBAC-PAD'13

Title: Applying Dynamic Parallelism to High Performance Normalization of Gene Expressions
Author(s): R.P. Souto, D. Augusto, P.L. Silva, C. Osthoff, A.T. Vasconcelos, O. Trelles, A. Rodríguez, M. Ujaldón.
Conference: 25th International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD'13).
Publication: Proceedings.
Place and date: Porto de Galinhas (Brasil). October, 22-24, 2013.
 

 

VIPIMAGE'13

Title: Quantifying the regeneration of bone tissue in biomedical images via Legendre Moments
Author(s): J.A. Lachiondo, M. Ujaldón, R. Berretta, P. Moscato.
Conference: IV ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing (VIPIMAGE'13).
Publication: Book from the editorial CRC Press, 2012, pages 289-294, Taylor & Francis Group, London.
Place and date: Funchal (Madeira, Portugal). October, 14-16, 2013.
 

 

IB2COM'12

Title: The GPU on High Performance Biomedical Computing
Author: M. Ujaldón.
Conference: 7th Intl. Conference on Broadband Communications & Biomedical Applications (IB2COM'12).
Publication: Proceedings. Pages 164-173.
Place and date: Sydney (Australia). November, 5-8, 2012.
 

 

MICCAI'12

Title: Medical Image Analysis on GPUs: Challenges and Future Trends
Author: M. Ujaldón.
Conference: 15th Intl. Conference on Medical Image Computing and Computer Assisted Intervention. Workshop on Data- and Compute-Intensive Clinical and Translational Imaging Applications  (MICCAI'12).
Publication: Proceedings. Pages 1-10.
Place and date: Niza (France). October, 1-5, 2012.
 

 

HPCS'12

Title: High Performance Computing and Simulations on the GPU using CUDA
Author: M. Ujaldón.
Conference: 10th ACM/IEEE Int. Conference on High Performance Computing and Simulations  (HPCS'12).
Publication: Proceedings IEEE Computer Society Press, pages 1-7.
Place and date: Madrid. July, 2-6, 2012.
 

 

VIPIMAGE'11 (2)

Title: GPU Acceleration of Legendre Moments as Biomarkers of Bone Tissue
Author(s): J.A. Lachiondo, M. Ujaldón.
Conference: III ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing (VIPIMAGE'11).
Publication: Book from the editorial CRC Press, 2012, pages 409-414, Taylor & Francis Group, London.
Place and date: Olhao (Algarve, Portugal). October, 12-14, 2011.
 

 

VIPIMAGE'11

Title: On the Accurate Classification of Bone Tissue Images
Author(s): J.E. Gil, J.P. Aranda, E. Mérida-Casermeiro, M. Ujaldón.
Conference: III ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing (VIPIMAGE'11). This paper received the Best Paper award.
Publication: Book from the editorial CRC Press, pages 415-421, 2012, Taylor & Francis Group, London.
Place and date: Olhao (Algarve, Portugal). October, 12-14, 2011.
 

 

HPCC'11 (2)

Title: High-Performance Computation of Moments for an Accurate Classification of Bone Tissue Images
Author(s): M.J. Martín-Requena, M. Ujaldón.
Conference: 13th IEEE Int. Conference on High Performance Computing and Communications (HPCC'11).
Publication: Proceedings IEEE Computer Society Press, pages 593-598.
Place and date: Banff (Alberta, Canada). September, 2-4, 2011.
 

 

HPCC'11

Title: Using Graphics Processors for a High Performance Normalization of Gene Expressions
Author(s): A. Rodríguez, O. Trelles, M. Ujaldón.
Conference: 13th IEEE Int. Conference on High Performance Computing and Communications  (HPCC'11).
Publication: Proceedings IEEE Computer Society Press, pages 599-604.
Place and date: Banff (Alberta, Canada). September, 2-4, 2011.
 

 

IPDPS'11 Workshop (2)

Title: Parallel Automatic Registration of Large Microscopic Images on a Multiprocessor of CPUs and GPUs
Author(s): L. Cooper, K. Huang, M. Ujaldón.
Conference: 25th IEEE Intl. Parallel and Distributed Processing Symposium. 10th Workshop on Parallel and Distributed Scientific and Engineering Computing (PDSEC'10).
Publication: Proceedings IEEE Computer Society Press, pages 1362.1371.
Place and date: Anchorage (Alaska, USA). May, 16-20, 2011.
 

 

IPDPS'11 Workshop

Title: Parallelization Strategies for Ant Colony Optimisation on GPUs
Author(s): J.M. Cecilia, J.M. García, M. Ujaldón, A. Nisbet, M. Amos.
Conference: 25th IEEE Intl. Parallel and Distributed Processing Symposium. Workshop on Natured Inspired Distributed Computing (NIDISC'10).
Publication: Proceedings IEEE Computer Society Press, pages 334-341.
Place and date: Anchorage (Alaska, USA). May, 16-20, 2011.
 

 

PACT'10 Workshop

Title: P Systems Simulations on Massively Parallel Architectures
Author(s): J.M. Cecilia, J.M. García, G.D. Guerrero, M.A. Martínez-del-Amor, M.J. Pérez-Jiménez, M. Ujaldón.
Conference: 19th ACM/IEEE Intl. Conference on Parallel Architectures and Compilation Techniques (PACT'10). 3rd Workshop on Parallel Architectures and Bioinspired Algorithms.
Publication: Proceedings ACM Press, pages 17-26.
Place and date: Vienna (Austria). September, 11-15, 2010.
 

 

JP'10

Title: Paralelización de Matrices de Coocurrencia con OpenMP y CUDA
Author(s): J. Franco, G. Bernabé, J. Fernández, M. Ujaldón.
Conference: XXI Jornadas de Paralelismo.
Publication: Proceedings, pages 575-582.
Place and date: Valencia. September, 7-10, 2010.
 

 

SAAHPC'10

Title: Enhancing the Simulation of P systems for the SAT Problem on GPUs
Author(s): J.M. Cecilia, J.M. García, G.D. Guerrero, M.A. Martínez-del-Amor, M.J. Pérez-Jiménez, M. Ujaldón.
Conference: 2010 IEEE Symposium on Application Accelerators in High Performance Computing (SAAHPC'10).
Publication: Proceedings IEEE Computer Society Press.
Place and date: Knoxville (Tennessee, USA). July, 13-15, 2010.
 

 

PARA'10 (2)

Title: CUDA 2D Stencil Computations for the Jacobi Method
Author(s): J.M. Cecilia, J.M. García, M. Ujaldón.
Conference: 10th Intl. Conference on the State of the Art in Scientific and Parallel Computing (PARA'10).
Publication: Proceedings published by Springer. Lecture Notes in Computer Science Series, volume 7133.
Place and date: Reykjavik (Island). June, 6-9, 2010.
 

 

PARA'10

Title: The GPU on the 2D Wavelet Transform. Survey and Contributions
Author(s): J. Franco, G. Bernabé, J. Fernández, M.E. Acacio, M. Ujaldón.
Conference: 10th Intl. Conference on the State of the Art in Scientific and Parallel Computing (PARA'10). Minisymposium on GPU Computing.
Publication: Proceedings published by Springer. Lecture Notes in Computer Science Series.
Place and date: Reykjavik (Island). June, 6-9, 2010.
 

 

ICCS'10

Title: Parallel 3D Fast Wavelet Transform on Manycore GPUs and Multicore CPUs
Author(s): J. Franco, G. Bernabé, J. Fernández, M. Ujaldón.
Conference: 10th International Conference on Computational Science.
Publication: Proceedings published by Elsevier Science. Procedia Computer Science Series, volume 1, number 1, pages 1101-1110. doi: 10.1016/j.procs.2010.04.122.
Place and date: Amsterdam (The Netherlands). May, 31th to June, 2nd, 2010.
 

 

HiPEAC'10 Workshop

Title: FATSEA - An Architectural Simulator for General-Purpose Computing on GPUs
Author(s): K.E. Ostby, J.L. Aragón, J.M. García, M. Ujaldón.
Conference: 2nd Workshop on Rapid Simulation and Performance Evaluation: Methods and Tools (RAPIDO'10), dentro del 5th IEEE Intl. Conference on High-Performance and Embedded Architectures and Compilers (HiPEAC'10).
Publication: Proceedings IEEE Computer Society Press.
Place and date: Pisa (Italy). January, 25-28, 2010.
 

 

VIPIMAGE'09

Title: Fast Texture Analysis via Zernike Moments on Graphics Processors
Author(s): M.J. Martín-Requena, M. Ujaldón.
Conference: II ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing (VIPIMAGE 2009).
Publication: Book from the editorial CRC Press, pages 403-408, 2010, Taylor & Francis Group, London.
Place and date: Porto (Portugal). October, 14-16, 2009.
 

 

ICME'09

Title: High-Performance Signal Processing on Emerging Many-Core Architectures Using CUDA
Author(s): M. Ujaldón, U. Catalyurek.
Conference: 16th IEEE International Conference on Multimedia and Expo.
Publication: Proceedings IEEE Computer Society Press, pages 1825-1828.
Place and date: New York (USA). June, 28 to July, 3rd, 2009.
 

 

IbPRIA'09

Title: High Performance Circle Detection through a GPU Rasterization Approach
Author(s): M. Ujaldón, N. Guil.
Conference: 4th I. Conference on Pattern Recognition and Image Analysis (IbPRIA'09).
Publication: Lecture Notes in Computer Science by Springer-Verlag, Volume 5524, pages 273-281.
Place and date: Povoa do Varzim (Portugal). June, 10-12, 2009.
 

 

IPDPS'09 Workshop

Title: GPU Acceleration of Zernike Moments for Large-Scale Images
Author(s): M. Ujaldón.
Conference: 23rd IEEE International Parallel and Distributed Processing Symposium. Workshop on Large-Scale Parallel Processing.
Publication: Proceedings IEEE Computer Society Press, pages 1-8.
Place and date: Rome (Italy). May, 25-29, 2009.
 

 

Supercomputing'08 Workshop

Title: GPU-accelerated Methods for Color and Texture Analysis of Biomedical Images
Author(s): M. Ujaldón.
Conference: IEEE/ACM Supercomputing 2008. Workshop on Multicore Architectures and Biomedical Imaging.
Publication: Proceedings.
Place and date: Austin (Texas, USA). November, 15-21, 2008.
 

 

JP'08

Title: BIPGPU: Una Biblioteca para el Procesamiento de Imágenes Optimizada sobre Procesadores Gráficos.
Author(s): A. Ruiz, M. Ujaldón, F. Igual, R. Mayo.
Conference: XIX Jornadas de Paralelismo.
Publication: Proceedings.
Place and date: University Jaume I. Castellón. September, 17-19, 2008.
 

 

ICS'08

Title: Biomedical Image Analysis on a Cooperative Cluster of GPUs and Multicores
Author(s): T. Hartley, U. Catalyurek, A. Ruiz, F. Igual, R. Mayo, M. Ujaldón.
Conference: 22nd ACM International Conference on Supercomputing.
Publication: Proceedings ACM Press, pages 15-25.
Place and date: Island of Kos (Greece). June, 7-12, 2008.
 

 

PARA'08

Title: Optimizing Co-occurrence Matrices on Graphics Processors Using Sparse Representations
Author(s): F. Igual, R. Mayo, T. Hartley, U. Catalyurek, A. Ruiz, M. Ujaldón.
Conference: 9th Intl. Workshop on State-of-the-Art in Scientific and Parallel Computing (PARA'08).
Publication: Lecture Notes in Computer Science.
Place and date: Trondheim (Norway). June, 2008.
 

 

ISBI'08

Title: Pathological Image Segmentation for Neuroblastoma Using the GPU
Author(s): A. Ruiz, J. Kong, M. Ujaldón, K. Boyer, J. Saltz, M. Gurcan.
Conference: IEEE Intl. Symposium on Biomedical Imaging: From Nano to Macro.
Publication: Proceedings IEEE Computer Society Press, pages 296-299.
Place and date: Paris (France). May, 14-17, 2008.
 

 

BII'08

Title: Computer-assisted Histopathology: Experience with Neuroblastoma and Follicular Lymphoma
Author(s): M. Gurcan, O. Sertel, J. Kong, A. Ruiz, M. Ujaldón, U. Catalyurek, G. Lozanski, H. Shimada, J. Saltz.
Conference: Workshop on Bio-Image Informatics: Biological Imaging, Computer Vision and Data Mining.
Publication: Proceedings.
Place and date: Santa Barbara (California, USA). January, 17-18, 2008.
 

 

BIBM'07

Title: Pathological Image Analysis Using the GPU: Stroma Classification for Neuroblastoma
Author(s): A. Ruiz, O. Sertel, M. Ujaldón, U. Catalyurek, M. Gurcan, J. Saltz.
Conference: IEEE Intl. Conference on BioInformatics and BioMedicine (BIBM'07).
Publication: Proceedings IEEE Computer Society Press, pages 78-88.
Place and date: Silicon Valley (California, USA). November, 2-4, 2007.
 

 

BIBE'07

Title: The GPU on Biomedical Image Processing for Color and Phenotype Analysis
Author(s): A. Ruiz, M. Ujaldón, J.A. Andrades, J. Becerra, K. Huang, T. Pan, J. Saltz.
Conference: 7th IEEE Intl. Symposium on BioInformatics & Bioengineering (BIBE'07).
Publication: Proceedings IEEE Computer Society Press, pages 1124-1128.
Place and date: Boston (Massachussets, USA). October, 14-17, 2007.
 

 

APIII'07

Title: Computationally Efficient Pathologic Image Analysis: Use of GPUs for Classification of Stromal Density
Author(s): O. Sertel, A. Ruiz, U. Catalyurek, M. Ujaldón, J. Saltz, M. Gurcan.
Conference: 12th Anatomic Pathology Informatics and Imaging Support for Translational Medicine (APIII'07).
Publication: Archives of Pathology and Laboratory Medicine.
Place and date: Pittsburgh (Pennsylvannia, USA). September, 9-12, 2007.
 

 

IbPRIA'07

Title: Using Graphics Hardware for Enhancing Edge and Circle Detection
Author(s): A. Ruiz, M. Ujaldón, N. Guil.
Conference: 3rd I. Conference on Pattern Recognition and Image Analysis (IbPRIA'07).
Publication: Lecture Notes in Computer Science por Springer-Verlag, Volume 4478, pages 234-241, 2007.
Place and date: Gerona (Spain). June, 2007.
 

 

ICST'07

Títle: El Procesador Gráfico como Acelerador de la Transformada Hough
Author(s): A. Ruiz, M. Ujaldón.
Conference: 2nd Intl. Conference on Science and Technology (ICST'07).
Publication: Proceedings.
Place and date: Málaga and Tánger. May, 21-23, 2007.
 

 

CAD/CG'05

Title: The GPU on Irregular Computing. Performance Issues and Contributions
Author(s): M. Ujaldón, J. Saltz.
Conference: 9th Intl. Conference on Computer Aided Design and Computer Graphics (CAD/CG'05).
Publication: Proceedings, pages 442-450.
Place and date: Hong-Kong (China). December, 2005.
 

 

ParCo'05

Title: Exploiting Parallelism on Irregular Applications Using the GPU
Author(s): M. Ujaldón, J. Saltz.
Conference: 12th Intl. Conference on Parallel Computing (ParCo'05).
Publication: Proceedings, pages 639-646.
Place and date: Malaga (Spain). September, 2005.
 

 

AIEB'00

Title: e-commerce for Interactive Video Databases
Author(s): R. Asenjo, I. Navarro, M. Rodríguez, M. Ujaldón, E.L. Zapata.
Conference: Intl. Conference on Advances in Infrastructure for Electronic Business, Science and Education on the Internet.
Publication: Proceedings.
Place and date: L'Aquila (Italy). August, 2000.
 

 

PDPTA'99

Title: Enhancing the Parallelization of Sparse Matrices Through Dynamic Issues
Author(s): G. Bandera, M. Ujaldón, E.L. Zapata.
Conference: Intl. Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA'99).
Publication: Proceedings, vol. 1, pages 1451-1457. CSREA Press.
Place and date: Las Vegas (Nevada, USA). July, 1999.
 

 

Supercomputing'97

Título: Page Replacement Using Marginal Loss Functions
Author(s): M. Ujaldón, S. Sharma, J. Saltz.
Conference: IEEE y ACM Supercomputing'97.
Publication: Proceedings (in CD-ROM).
Place and date: San Jose (California, USA). November, 1997.
 

 

IPPS'97

Title: The Sparse Cyclic Distribution against its Dense Counterparts
Author(s): G. Bandera, M. Ujaldón, M.A. Trenas, E.L. Zapata.
Conference: 11th IEEE Intl. Parallel Processing Symposium (IPPS'97).
Publication: Proceedings, pages 638-642.
Place and date: Geneve (Switzerland). April, 1997.
 

 

ICS'96

Title: Experimental Evaluation of Efficient Sparse Matrix Distributions
Author(s): M. Ujaldón, E.L. Zapata, S. Sharma, J. Saltz.
Conference: 10th ACM Intl. Conference on Supercomputing (ICS'96).
Publication: Proceedings, pages 78-85.
Place and date: Philadelphia (Pennsylvania, USA). May, 1996
 

 

CSC'95

Title: Parallelization of Sparse Matrix Problems using Distributed Representation of Matrices
Author(s): M. Ujaldón, E.L. Zapata, S.D. Sharma, J.Saltz.
Conference: Concurrent Supercomputing Consortium.
Publication: Annual Report, pages 83-84.
Place and date: California Institute of Technology (USA). December, 1995.
 

 

Euromicro'94

Title: 3D Reconstruction of Macromolecules on Multiprocessors
Author(s): M. Ujaldón, R. Asenjo, J.C. Cabaleiro, J.M. Carazo, E.L. Zapata.
Conference: 2nd Euromicro Workshop on Parallel and Distributed Processing.
Publication: Proceedings, pages. 260-267.
Place and date: Málaga. January, 1994.
 

 

PPE'96

Title: Compilation Issues for Irregular Problems
Author(s): R. Asenjo, G.P. Trabado, M. Ujaldón, E.L. Zapata.
Congreso: Workshop on Parallel Programming Environments.
Publication: Proceedings, pages 187-199.
Place and date: L'Alpe d'Huez (France). April, 1996.
 

 

HPF2'94

Title: Parallel Sparse LU Factorization
Author(s): R. Asenjo, M. Ujaldón, E.L. Zapata.
Conference: Contribution to High Performance Fortran Forum.
Publication: Report "HPF-2 Scope of Activities and Motivating Applications", pages 72-78.
Place and date: November, 1994.
 

 

ICS'95

Title: Efficient Resolution of Sparse Indirections in Data-Parallel Compilers
Author(s): M. Ujaldón, E.L. Zapata.
Conference: 9th ACM International Conference on Supercomputing (ICS'95).
Publication: Proceedings ACM Press, pages 117-126.
Place and date: Barcelona. July, 1995.
 

 

IPPS'95

Title: New Data-Parallel Language Features for Sparse Matrix Computations
Author(s): M. Ujaldón, E.L. Zapata, B. Chapman, H. Zima.
Conference: 9th IEEE Intl. Parallel Processing Symposium (IPPS'95).
Publication: Proceedings IEEE Computer Society Press, pages. 742-749.
Place and date: Santa Barbara (California, USA). April, 1995.
 

 

IRREGULAR'95

Title: Run-Time Techniques for Parallelizing Sparse Matrix Problems
Author(s): M. Ujaldón, S. Sharma, J. Saltz, E.L. Zapata.
Conference: 2nd Intl. Workshop on Parallel Algorithms for Irregularly Structured Problems (IRREGULAR'95).
Publication: Lecture Notes in Computer Science por Springer-Verlag. Volume 980, pages 43-57, 1995.
Place and date: Lyon (France). September, 1995.
 

 

WCPC'95

Title: Development and Implementation of Data-Parallel Compilation Techniques for Sparse Codes
Author(s): M. Ujaldón, E.L. Zapata.
Conference: 5th Workshop on Compilers for Parallel Computers (WCPC'95).
Publication: Proceedings, pages 78-97.
Place and date: Málaga. June, 1995.