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ARTICLES PUBLISHED BY M. UJALDON IN JOURNALS AND BOOK CHAPTERS
Concurrency & Computation: Practice & Experience, 2018
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Title: |
Energy-based Tuning of Convolutional Neural Networks on Multi-GPUs |
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Author(s): |
F.M. Castro, N. Guil, M.J. Marín-Jiménez, J. Pérez, M. Ujaldón. |
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Published in: |
Concurrency and Computation: Practice and Experience. |
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Reference: |
Volume 31, Number 21, special issue. https://doi.org/10.1002/cpe.4786 (22 pages). |
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Date: |
November, 2019. |
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Sustainable Computing, 2018
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Title: |
Energy-aware Acceleration on GPUs: Findings on a Bioinformatics Benchmark |
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Author(s): |
J. Pérez, A. Rodríguez, J.F. Chico, D. López-Rodríguez, M. Ujaldón. |
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Published in: |
J. Sustainable Computing. Elsevier Science. |
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Reference: |
Volume 20, pages 88-101. |
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Date: |
December, 2018. |
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BMC Bioinformatics, 2018
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Title: |
DNA Sequences Alignment in Multi-GPUs: Acceleration and Energy Payoff |
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Author(s): |
J. Pérez, E. Sandes, A. Melo, M. Ujaldón. |
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Published in: |
BMC Bioinformatics. |
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Reference: |
Volume 19, Supplement 14, pages 161-176. |
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Date: |
November, 2018. |
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Concurrency & Computation: Practice & Experience, 2018
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Title: |
Energy-based Tuning of Metaheuristics for Molecular Docking on Multi-GPUs |
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Author(s): |
J. Pérez, B. Imbernón, J.M. Cecilia, M. Ujaldón. |
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Published in: |
Concurrency and Computation: Practice and Experience. |
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Reference: |
Volume 30, number 17, pages 1-17. |
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Date: |
September, 2018. |
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Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, 2016
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Title: |
Legendre Moments as High Performance Bone Biomarkers: Computational Methods and GPU Acceleration |
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Author(s): |
J.A. Lachiondo, M. Ujaldón, R. Berretta, P. Moscato. |
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Published in: |
Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization. |
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Reference: |
Volume 4, numbers 3-4, pages 146-163. |
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Date: |
October, 2016. |
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Current Bioinformatics, 2016
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Title: |
GPU Acceleration of an Entropy-based Model to Quantify Epistatic Interactions Between SNPs |
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Author(s): |
C. Riveros, M. Ujaldón, P. Moscato. |
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Published in: |
Current Bioinformatics. |
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Reference: |
Volume 11, number 4, pages 396-407. |
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Date: |
September, 2016. |
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Journal Cluster Computing, 2016
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Title: |
Dynamic Load Balancing on Heterogeneous Clusters for Parallel Ant Colony Optimization |
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Author(s): |
A. Llanes, J.M. Cecilia, A. Sánchez, J. M. García, M. Amos, M. Ujaldón. |
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Published in: |
Journal Cluster Computing. |
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Reference: |
Volume 19, number 1, pages 1-11. |
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Date: |
March, 2016. |
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Concurrency and Computation: Practice and Experience, 2014
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Title: |
Towards an Energy Efficient Heterogeneous Processors: Findings on Virtual Screening Methods |
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Author(s): |
G.D. Guerrero, J.M. Cebrián, H. Pérez-Sánchez, J.M. García, M. Ujaldón, J.M. Cecilia. |
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Published in: |
Concurrency and Computation: Practice and Experience. |
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Reference: |
Volume 26, issue 10, pages 1832-1846. |
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Date: |
July, 2014. |
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Journal of Supercomputing, 2014 (2)
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Title: |
Comparative Evaluation of Platforms for Parallel Ant Colony Optimization |
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Author(s): |
G.D. Guerrero, J.M. Cecilia, A. Llanes, J.M. García, M. Amos, M. Ujaldón. |
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Published in: |
Journal of Supercomputing. |
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Reference: |
Volume 69, Issue 1, pages 318-329. |
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Date: |
July, 2014. |
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Journal of Supercomputing, 2014
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Title: |
Evaluating the SAT Problem on P systems for Different High-Performance Architectures |
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Author(s): |
J.M. Cecilia, J.M. García, G.D. Guerrero, M. Ujaldón. |
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Published in: |
Journal of Supercomputing. |
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Reference: |
Volume 69, Issue 1, pages 248-272. |
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Date: |
July, 2014. |
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Annals of Multicore and GPU Programming, 2014
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Title: |
Exploiting Kepler Capabilities on Zernike Moments |
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Author(s): |
A. Ruiz, M. Ujaldón. |
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Published in: |
Annals of Multicore and GPU Programming. |
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Reference: |
Volume 1, number 1, pages 27-37. |
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Date: |
April, 2014. |
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Journal Parallel and Distributed Computing, 2014
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Title: |
Efficient Data Partitioning for the GPU Computation of Moment Functions |
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Author(s): |
M.J. Martín-Requena, P. Moscato, M. Ujaldón. |
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Published in: |
Journal Parallel and Distributed Computing. |
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Reference: |
Volume 74, number 1, pages 1994-2004. |
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Date: |
January, 2014. |
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Book Medical Image Processing and Computational Vision, 2013
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Title: |
A Survey for the Automatic Classification of Bone Tissue Images |
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Author(s): |
J.E. Gil, J.P. Aranda, E. Mérida-Casermeiro, M. Ujaldón. |
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Published in: |
Book "Topics in Medical Image Processing and Computational Vision". Computational Vision and Biomechanics Series. Ed. Springer (chapter 10). |
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Reference: |
Volume 8, pages 181-200. |
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Date: |
April, 2013. |
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Journal of Supercomputing, 2013
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Title: |
Enhancing GPU Parallelism in Nature-inspired Algorithms |
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Author(s): |
J.M. Cecilia, A. Nysbet, M. Amos, J.M. García, M. Ujaldón. |
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Published in: |
Journal of Supercomputing. |
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Reference: |
Volume 63, number 3, pages 773-789. |
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Date: |
March, 2013. |
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Journal Parallel and Distributed Computing, 2013
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Title: |
Enhancing Data Parallelism for Ant Colony Optimization on GPU |
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Author(s): |
J.M. Cecilia, J.M. García, A. Nisbet, M. Amos, M. Ujaldón. |
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Published in: |
Journal Parallel and Distributed Computing. Special Issue on Metaheuristics on GPUs |
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Reference: |
Volume 73, number 1, pages 42-51. |
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Date: |
January, 2013. |
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Intl. Journal for Numerical Methods in Biomedical Engineering, 2012
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Title: |
Efficient Biomarkers for the Characterization of Bone Tissue |
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Author(s): |
J.E. Gil, J.P. Aranda, E. Mérida-Casermeiro, M. Ujaldón. |
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Published in: |
Intl. Journal for Numerical Methods in Biomedical Engineering. |
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Reference: |
Volume 62, number 2, pages 787-803. |
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Date: |
December, 2012. |
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Journal of Supercomputing, 2012
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Title: |
Stencil Computations on Heterogeneous Platforms for the Jacobi Method: GPUs versus Cell BE |
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Author(s): |
J.M. Cecilia, J.L. Abellán, J. Fernández, M.E. Acacio, J.M. García, M. Ujaldón. |
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Published in: |
Journal of Supercomputing. |
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Reference: |
Volume 62, number 2, pages 787-803. |
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Date: |
November, 2012. |
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Journal Real Time Image Processing, 2012
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Title: |
The 2D Wavelet Transform on Emerging Architectures: GPUs and Multicores |
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Author(s): |
J. Franco, G.Bernabé, J. Fernández, M. Ujaldón. |
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Published in: |
Journal Real-Time Image Processing. Special Issue on Parallel Computing for Real-Time Image Processing. |
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Reference: |
Volume 7, number 3, pages 145-152. |
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Date: |
June, 2012. |
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Journal Soft Computing, 2012
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Títle: |
The GPU on the Simulation of Cellular Computing Models |
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Author(s): |
J.M. Cecilia, J.M. García, G.D. Guerrero, M.A. Martínez-del-Amor, M.J. Pérez-Jiménez, M. Ujaldón. |
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Published in: |
Journal Soft Computing. Special Issue on Evolutionary Computation on General-Purpose Graphics Processing Units. |
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Reference: |
Volume 16, number 2, pages 231-246. |
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Date: |
February, 2012. |
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Journal High Performance Computing Applications, 2011
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Title: |
Color and Texture Analysis on Emerging Parallel Architectures |
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Author(s): |
F. Igual, R. Mayo, T. Hartley, U. Catalyurek, A. Ruiz, M. Ujaldón. |
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Published in: |
Journal High Performance Computing Applications. |
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Reference: |
Volume 25, number 4, pages 404-427. |
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Date: |
November, 2011. |
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Book Computational Vision and Medical Image Processing, 2011
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Title: |
Leveraging Graphics Hardware for an Automatic Classification of Bone Tissue |
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Author(s): |
M.J. Martín-Requena, M. Ujaldón. |
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Published in: |
Book "Computational Vision and Medical Image Processing - Recent Trends". Computational Methods in Applied Sciences Series. Ed. Springer (chapter 19). |
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Reference: |
Pages 209-228. |
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Date: |
November, 2010. |
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Journal of Applied Computational Electromagnetic Society, 2010
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Title: |
Using GPUs for Accelerating Electromagnetic Simulations |
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Author(s): |
M. Ujaldón. |
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Published in: |
Journal of Applied Computational Electromagnetic Society. Special Issue on Hardware Accelerated Computational Techniques for Electromagnetic Simulations of Complex Problems. |
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Reference: |
Volume 25, number 4, pages 294-302. |
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Date: |
April, 2010. |
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Book Advances in Parallel Computing (1), 2010
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Title: |
The GPU on the Matrix-Matrix Multiply: Performance Study and Contributions |
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Author(s): |
J.M. Cecilia, J.M. García-Carrasco, M. Ujaldón. |
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Published in: |
Book "Advances in Parallel Computing. Parallel Computing: From Multicores and GPUs to Petascale" (chapter 19). |
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Reference: |
Pages 331-340. |
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Date: |
2010. |
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Book Advances in Parallel Computing (2), 2010
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Title: |
Exploring the GPU for Enhancing Parallelism on Color and Texture Analysis |
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Author(s): |
F. Igual, R. Mayo, U. Catalyurek, T. Hartley, A. Ruiz, M. Ujaldón. |
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Published in: |
Book "Advances in Parallel Computing. Parallel Computing: From Multicores and GPUs to Petascale" (chapter 19). |
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Reference: |
Pages 299-306. |
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Date: |
2010. |
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Book High Throughput Image Reconstruction and Analysis, 2009
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Title: |
Scalable Image Registration and 3D Reconstruction at Microscopic Resolution |
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Author(s): |
L. Cooper, K. Huang, A. Ruiz, M. Ujaldón. |
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Published in: |
Chapter of book High Throughput Image Reconstruction and Analysis. ArTech House Publishers |
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Reference: |
Pages 173-199. |
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Date: |
2009. |
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Book Advances in Parallel Computing, 2009
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Title: |
Processing of Large-Scale Biomedical Images on a Cluster of Multi-Core CPUs and GPUs |
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Author(s): |
U. Catalyurek, T. Hartley, O. Sertel, M. Ujaldón, A. Ruiz, J. Saltz, M. Gurcan. |
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Published in: |
Book "Advances in Parallel Computing. High Speed and Large Scale Scientific Computing". IOS Press (chapter 18). |
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Reference: |
Pages 341-364. |
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Date: |
2009. |
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Intl. Journal of Data Mining and Bioinformatics, 2009
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Title: |
Stroma Classification for Neuroblastoma on Graphics Processors |
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Author(s): |
A. Ruiz, O. Sertel, M. Ujaldón, U. Catalyurek, J. Saltz, M. Gurcan. |
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Published in: |
Intl. Journal of Data Mining and Bioinformatics. Ed. Inderscience. |
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Reference: |
Volume 3, number 3, pages 280-298. |
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Date: |
2009. |
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Journal of Signal Processing Systems, 2009
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Title: |
Non-rigid Registration for Large Set of Microscopic Images on Graphics Processors |
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Author(s): |
A. Ruiz, M. Ujaldón, L. Cooper, K. Huang. |
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Published in: |
Journal of Signal Processing Systems for Signal, Image and Video Technology. Special Issue on Biomedical Imaging. |
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Reference: |
Volume 55, number 1, pages 229-250. |
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Date: |
January, 2009. |
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Journal of Parallel and Distributed Computing, 2008
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Title: |
Recognition of Circular Patterns on GPUs: Performance Analysis and Contributions |
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Author(s): |
A. Ruiz, N. Guil, M. Ujaldón. |
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Published in: |
Journal of Parallel and Distributed Computing. Special Issue on General-Purpose Parallel Processing Using GPUs. |
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Reference: |
Volume 68, number 10, pages 1329-1338. |
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Date: |
October, 2008. |
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Pattern Recognition Letters, 2008
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Title: |
On the Computation of the Circle Hough Transform by a GPU Rasterizer |
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Author(s): |
M. Ujaldón, A. Ruiz, N. Guil. |
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Published in: |
Pattern Recognition Letters. |
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Reference: |
Volume 29, number 3, pages 309-318. |
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Date: |
March, 2008. |
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Libro Parallel Computing, 2006
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Title: |
Exploiting Parallelism on Irregular Applications Using the GPU |
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Author(s): |
M. Ujaldón, J. Saltz. |
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Published in: |
Book "Parallel Computing: Current & Future Issues of High-End Computing" from the John von Neumann Institute for Computing Series (chapter 33). |
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Reference: |
Pages 639-646. |
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Date: |
2006. |
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Intl. Journal of Electronic Business, 2005
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Title: |
The GPU as an Indirection Engine for a Fast Information Retrieval |
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Author(s): |
M. Ujaldón, J. Saltz. |
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Published in: |
International Journal of Electronic Business. |
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Reference: |
Volume 3, number 3/4, pages 316-327. |
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Date: |
July-August 2005. |
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The Journal of Supercomputing, 2000
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Title: |
Compile-Time and Run-Time Support for the Parallelization of Sparse Matrix Updating Algorithms |
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Author(s): |
G. Bandera, M. Ujaldón, E.L. Zapata. |
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Published in: |
The Journal of Supercomputing. |
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Reference: |
Volume 17, number 3, pages 263-276. |
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Date: |
November, 2000. |
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IEEE Transactions on Parallel and Distributed Systems, 1997
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Title: |
Vienna-Fortran/HPF Extensions for Sparse and Irregular Problems and Their Compilation |
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Author(s): |
M. Ujaldón, E.L. Zapata, B. Chapman, H. Zima. |
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Published in: |
IEEE Transactions on Parallel and Distributed Systems. |
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Reference: |
Volume 8, number 10, pages 1068-1083. |
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Date: |
October, 1997. |
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Journal of Parallel and Distributed Computing, 1996
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Title: |
Parallelization Techniques for Sparse Matrix Applications |
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Author(s): |
M. Ujaldón, E.L. Zapata, S.D. Sharma, J. Saltz. |
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Published in: |
Journal of Parallel and Distributed Computing. Academic Press. |
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Reference: |
Volume 38, number 2, pages 256-266. |
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Date: |
November, 1996. |
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Libro Advances in Parallel Computing, 1995
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Title: |
Sparse Block and Cyclic Data Distributions for Matrix Computations |
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Author(s): |
R. Asenjo, L.F. Romero, M. Ujaldón, E.L. Zapata. |
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Published in: |
Book in Advances in Parallel Computing Series (chapter 10). Elsevier Science. North-Holland, Amsterdam (Holland). |
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Reference: |
Pages 359-378. |
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Date: |
1995. |
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Libro de Kluwer Academic Publishers, 1995.
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Title: |
Data-Parallel Computation for Sparse Codes. A Survey and Contributions |
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Author(s): |
M. Ujaldón, E.L. Zapata, B. Chapman, H. Zima. |
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Published in: |
Book "Languages, Compilers, and Run-Time Systems for Scalable Computers'' (chapter 19). Kluwer Academic Publishers. |
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Reference: |
Pages 253-264. |
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Date: |
1995. |
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Journal Physical Review, 1994
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Title: |
Molecular Dynamics Simulation on Simple Fluids: Departure from linearized hydrodynamic behaviour of the dynamical structure factor |
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Author(s): |
E. Enciso, N.G. Almarza, V. del Prado, F.J. Bermejo, E.L. Zapata, M. Ujaldón. |
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Published in: |
Journal Physical Review E. |
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Reference: |
Volume 50, number 2, pages 1336-1340. |
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Date: |
August, 1994. |
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Journal Microprocessing and Microprogramming, 1993
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Title: |
Parallel WZ Factorization on Mesh Multiprocessors |
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Author(s): |
R. Asenjo, M. Ujaldón, E.L. Zapata. |
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Published in: |
Journal Microprocessing and Microprogramming. |
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Reference: |
Volume 38, number 5, pages 319-326. |
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Date: |
September, 1993. |
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